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Genomics

Accepted data

Genomic data

Supporting institutions

European Molecular Biology Laboratory European Bioinformatics Institute (EMBL-EBI)

Persistent identifiers

DOI (on request)

Internal identifier

Volume limit

Volume limit per file : Not specified, but a special deposit protocol exists for datasets with more than 1,000 files.

Volume limit per dataset : Unknown limit

Repository provided moderation

Automatic and human. Filing is done via the Annotare tool. Details provided here: https://www.ebi.ac.uk/fg/annotare/help/submit_exp.html. Additional integrity checks are performed on the raw sequencing data (fastq.gz) before a dataset access number is assigned.

Notes

High-throughput functional genomic data from microarrays or next-generation sequencing (mRNA and miRNA, SNP genotyping, ChIP chromatin immunoprecipitation etc.) Datasets typically include sample annotations, protocols, analysis data and raw data. All types of experiments deposited in the warehouse are listed here: https://www.ebi.ac.uk/fg/annotare/help/experiment_types.html.

Submit / Publish a dataset

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